CRAN Package Check Results for Package SourceSet

Last updated on 2022-05-18 03:53:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.3 5.02 12.08 17.10 FAIL
r-devel-linux-x86_64-debian-gcc 0.1.3 3.53 89.42 92.95 NOTE
r-devel-linux-x86_64-fedora-clang 0.1.3 145.80 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.3 165.86 NOTE
r-devel-windows-x86_64 0.1.3 19.00 184.00 203.00 NOTE
r-patched-linux-x86_64 0.1.3 3.32 118.16 121.48 NOTE
r-release-linux-x86_64 0.1.3 3.53 122.39 125.92 NOTE
r-release-macos-arm64 0.1.3 49.00 ERROR
r-release-macos-x86_64 0.1.3 95.00 NOTE
r-release-windows-x86_64 0.1.3 22.00 175.00 197.00 NOTE
r-oldrel-macos-arm64 0.1.3 125.00 NOTE
r-oldrel-macos-x86_64 0.1.3 117.00 NOTE
r-oldrel-windows-ix86+x86_64 0.1.3 9.00 118.00 127.00 NOTE

Additional issues

donttest

Check Details

Version: 0.1.3
Check: package dependencies
Result: FAIL
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.1.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘r2cytoscape’
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'r2cytoscape', 'hgu95av2.db'
Flavor: r-release-macos-arm64

Version: 0.1.3
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘SourceSet.Rmd’ using rmarkdown
    Loading required package: graph
    Loading required package: BiocGenerics
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which.max, which.min
    
    Identifing all possible orderings..
    Total run time: 0.61 secs
    Identifing all possible orderings..
    Total run time: 0.46 secs
    Loading required package: Biobase
    Welcome to Bioconductor
    
     Vignettes contain introductory material; view with
     'browseVignettes()'. To cite Bioconductor, see
     'citation("Biobase")', and for packages 'citation("pkgname")'.
    
    Quitting from lines 419-429 (SourceSet.Rmd)
    Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
    there is no package called 'hgu95av2.db'
    --- failed re-building ‘SourceSet.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘SourceSet.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-arm64