greatR: Gene Registration from Expression and Time-Courses in R

A tool for registering (aligning) gene expression profiles between reference and query data.

Version: 2.0.0
Depends: R (≥ 4.1.0)
Imports: cli, data.table, furrr, future, ggplot2, neldermead, optimization, patchwork, scales, stats
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-04-09
Author: Ruth Kristianingsih ORCID iD [aut, cre]
Maintainer: Ruth Kristianingsih <ruth.kristianingsih30 at gmail.com>
BugReports: https://github.com/ruthkr/greatR/issues/
License: GPL (≥ 3)
URL: https://ruthkr.github.io/greatR/, https://github.com/ruthkr/greatR/
NeedsCompilation: no
Materials: README NEWS
CRAN checks: greatR results

Documentation:

Reference manual: greatR.pdf
Vignettes: Input data requirements
Processing results
Registering data without optimisation
Registering data

Downloads:

Package source: greatR_2.0.0.tar.gz
Windows binaries: r-devel: greatR_2.0.0.zip, r-release: greatR_2.0.0.zip, r-oldrel: greatR_2.0.0.zip
macOS binaries: r-release (arm64): greatR_2.0.0.tgz, r-oldrel (arm64): greatR_2.0.0.tgz, r-release (x86_64): greatR_2.0.0.tgz
Old sources: greatR archive

Linking:

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