tidysdm: Species Distribution Models with Tidymodels

Fit species distribution models (SDMs) using the 'tidymodels' framework, which provides a standardised interface to define models and process their outputs. 'tidysdm' expands 'tidymodels' by providing methods for spatial objects, as well as a number of specialised functions to process presences and pseudoabsences for contemporary and palaeo datasets. The full functionalities of the package are described in Leonardi et al. (2023) <doi:10.1101/2023.07.24.550358>.

Version: 0.9.4
Depends: tidymodels, spatialsample, R (≥ 3.50)
Imports: dials, DALEX, DALEXtra, dplyr, ggplot2, lubridate, magrittr, maxnet, parsnip, patchwork, recipes, rsample, rlang (≥ 1.0.0), stats, sf, terra, tibble, tune, workflows, workflowsets, yardstick
Suggests: blockCV, data.table, doParallel, earth, kernlab, knitr, overlapping, pastclim (≥ 2.0.0), ranger, rmarkdown, spelling, stacks, testthat (≥ 3.0.0), tidyterra, xgboost, V8
Published: 2024-03-05
Author: Michela Leonardi [aut], Margherita Colucci [aut], Andrea Manica [aut, cre]
Maintainer: Andrea Manica <am315 at cam.ac.uk>
BugReports: https://github.com/EvolEcolGroup/tidysdm/issues
License: AGPL (≥ 3)
URL: https://github.com/EvolEcolGroup/tidysdm, https://evolecolgroup.github.io/tidysdm/
NeedsCompilation: no
Language: en-GB
Materials: README NEWS
CRAN checks: tidysdm results

Documentation:

Reference manual: tidysdm.pdf
Vignettes: tidysdm overview
Application with palaeodata
Examples of additional tidymodels features
Troubleshooting models that fail

Downloads:

Package source: tidysdm_0.9.4.tar.gz
Windows binaries: r-prerel: tidysdm_0.9.4.zip, r-release: tidysdm_0.9.4.zip, r-oldrel: tidysdm_0.9.4.zip
macOS binaries: r-prerel (arm64): tidysdm_0.9.4.tgz, r-release (arm64): tidysdm_0.9.4.tgz, r-oldrel (arm64): tidysdm_0.9.4.tgz, r-prerel (x86_64): tidysdm_0.9.4.tgz, r-release (x86_64): tidysdm_0.9.4.tgz
Old sources: tidysdm archive

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